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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4296524 chr22:32113080 C/T NHP2L1 chr22:42069934-42086508:- 0.6 7.03 7.06E-12 Box Plot
THCA rs4296524 chr22:32113080 C/T RBX1 chr22:41347351-41369313:+ 0.46 7.1 4.61E-12 Box Plot
THCA rs4296524 chr22:32113080 C/T UQCR10 chr22:30163358-30166402:+ 0.38 5.96 5.01E-9 Box Plot
THCA rs4297160 chr9:100585506 G/A NKX6-1 chr4:85413140-85419603:- 0.37 6.21 1.18E-9 Box Plot
THCA rs4299827 chr6:26590249 G/A ZNF322B chr9:99957633-99961910:- 0.75 15.35 1.56E-43 Box Plot
THCA rs4300379 chr11:51504993 G/A FOLH1B chr11:89372395-89431886:+ -0.36 -6.09 2.39E-9 Box Plot
THCA rs4301736 chr10:51821977 A/T FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs4302598 chr5:46019167 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.18 2.55E-15 Box Plot
THCA rs4304169 chr6:99467206 G/A BAALC chr8:104152938-104242533:+ 0.33 6.09 2.33E-9 Box Plot
THCA rs430685 chr17:44859148 T/C C17orf69 chr17:43716341-43723594:+ -0.53 -11.73 4.37E-28 Box Plot
THCA rs430685 chr17:44859148 T/C LOC644172 chr17:43677491-43679748:- -1.11 -19.15 4.6E-61 Box Plot
THCA rs430685 chr17:44859148 T/C LRRC37A4 chr17:43578685-43595516:- 0.69 16.75 7.32E-50 Box Plot
THCA rs430685 chr17:44859148 T/C MGC57346 chr17:43697712-43715327:+ -0.49 -9.38 2.71E-19 Box Plot
THCA rs430685 chr17:44859148 T/C PLEKHM1 chr17:43513266-43568115:- -0.33 -6.7 5.91E-11 Box Plot
THCA rs4309618 chr2:132274077 A/G CCDC74B chr2:130896860-130902707:- 0.39 6.93 1.34E-11 Box Plot